UTI Knowledge Center
Microorganism Spotlight

C. freundii

Emery Haley, PhD, Scientific Writing Specialist

Citrobacter freundii

Clinical Summary

  • C. freundii is recognized as a classical gram-negative, urease-variable, biofilm-forming uropathogen.
  • C. freundii is associated with complicated UTI in older adult and pediatric populations.
  • In symptomatic UTI patients, C. freundii: 
  • Is not a contaminant (is found in catheter-collected urine specimens).
  • Is viable (can grow out on culture).
  • Is pathogenic (associated with elevated urine biomarkers of infection).
  • Reported severe complications of C. freundii UTI include polymicrobial bacteremia and urosepsis.
  • Multidrug-resistant C. freundii (especially among hospital-acquired UTIs) is a significant global health threat.

Bacterial Characteristics

Gram-stain

Gram-negative

Morphology

Bacillus

Growth Requirements

Non-fastidious (grows well in standard urine culture conditions)
Facultative anaerobe

Nitrate Reduction

Yes

Urease

Variable

Biofilm Formation

Yes

Pathogenicity

Colonizer or Pathobiont

Clinical Relevance in UTI

C. freundii is a urease-variable microorganism ​[1]​ capable of forming biofilms.​[2]​  C. freundii is typically considered to be among the common classical uropathogens in older adults,​[3]​  but is also being increasingly recognized as common in pediatric UTIs.​[4]​ 

In a study of older adult males and females with clinically suspected complicated UTI, C. freundii was detected in both midstream voided and in-and-out-catheter collected specimens indicating that it was truly present in the bladder, not simply a contaminant picked up during voiding.​[5]​  Furthermore, elevated markers of immune system activation in the urinary tract have been measured from the same clinical urine specimens in which C. freundii was detected, indicating that the presence of C. freundii was associated with an immune response to urinary tract infection.​[6–8]​  ​ ​  

Hospital-acquired C. freundii UTIs pose a particularly serious threat, as these infections increasingly display multidrug- or pandrug-resistant.​[9–11]​  Although not considered one of the six highest priority “ESKAPE” pathogens, The World Health Organization (WHO) has included this organism in the 2024 Bacterial Priority Pathogens List (BPPL).[111]  Severe complications of C. freundii UTI, including polymicrobial bacteremia and urosepsis, have been reported.​[12–14]​   

Together, these findings indicate that C. freundii should be seriously considered as a uropathogen and demonstrate the value of detecting this organism, particularly in individuals with recurrent UTI and/or risk factors for persistent or complicated UTI.

Treatment

Evidence of Efficacy (Checkmarks): Cefepime, Ciprofloxacin, Doxycycline, Gentamicin, Levofloxacin, Meropenem, Nitrofurantoin, Piperacillin/Tazobactam, Sulfamethoxazole/Trimethoprim, and Trimethoprim.

About the Author

Dr. Emery Haley is a scientific writing specialist with over ten years of experience in translational cell and molecular biology. As both a former laboratory scientist and an experienced science communicator, Dr. Haley is passionate about making complex research clear, approachable, and relevant. Their work has been published in over 10 papers and focuses on bridging the gap between the lab and real-world patient care to help drive better health outcomes.

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